`bucky.model.derived_epi_params`#

Calculate derived SEIR parameters from the input parameterization.

Module Contents#

Functions#

`add_derived_params`(epi_params, structure_cfg)	Add the derived params that are calculated from the rerolled ones.
`calc_Reff`(m, n, Tg, Te, r)	Calculate the effective reproductive number.
`calc_Te`(Tg, Ts, n, f)	Calculate the latent period.
`calc_Ti`(Te, Tg, n)	Calcuate the infectious period.
`calc_beta`(Te)	Derive beta from Te.
`calc_gamma`(Ti)	Derive gamma from Ti.

bucky.model.derived_epi_params.add_derived_params(epi_params, structure_cfg)[source]#: Add the derived params that are calculated from the rerolled ones.

bucky.model.derived_epi_params.calc_Reff(m, n, Tg, Te, r)[source]#: Calculate the effective reproductive number.

bucky.model.derived_epi_params.calc_Te(Tg, Ts, n, f)[source]#: Calculate the latent period.

bucky.model.derived_epi_params.calc_Ti(Te, Tg, n)[source]#: Calcuate the infectious period.

bucky.model.derived_epi_params.calc_beta(Te)[source]#: Derive beta from Te.

bucky.model.derived_epi_params.calc_gamma(Ti)[source]#: Derive gamma from Ti.